Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LAMB1P07942 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMB1P07942 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LAMB1P07942 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMB1P07942 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LAMB1P07942 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMB1P07942 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
LAMB1P07942 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 DPM3-202ENST00000368399 517 ntBASIC17.8■□□□□ 0.44
LAMB1P07942 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.8■□□□□ 0.44
LAMB1P07942 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LAMB1P07942 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.8■□□□□ 0.44
LAMB1P07942 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMB1P07942 AL358472.3-201ENST00000608147 415 ntBASIC17.8■□□□□ 0.44
LAMB1P07942 INE2-201ENST00000630399 1874 ntBASIC17.8■□□□□ 0.44
LAMB1P07942 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMB1P07942 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
LAMB1P07942 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB1P07942 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LAMB1P07942 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LAMB1P07942 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.79■□□□□ 0.44
LAMB1P07942 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 AC005324.6-201ENST00000587972 613 ntBASIC17.79■□□□□ 0.44
LAMB1P07942 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMB1P07942 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LAMB1P07942 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMB1P07942 AL590440.2-201ENST00000641973 1595 ntBASIC17.79■□□□□ 0.44
LAMB1P07942 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LAMB1P07942 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.79■□□□□ 0.44
LAMB1P07942 AC132192.2-201ENST00000596206 1147 ntBASIC17.79■□□□□ 0.44
LAMB1P07942 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.79■□□□□ 0.44
LAMB1P07942 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMB1P07942 AC006480.2-201ENST00000609770 1337 ntBASIC17.78■□□□□ 0.44
LAMB1P07942 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LAMB1P07942 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LAMB1P07942 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.78■□□□□ 0.44
LAMB1P07942 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.78■□□□□ 0.44
LAMB1P07942 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LAMB1P07942 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LAMB1P07942 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.77■□□□□ 0.44
LAMB1P07942 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LAMB1P07942 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LAMB1P07942 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LAMB1P07942 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms