Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 NUS1P3-201ENST00000423502 862 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 ENPP7P5-201ENST00000541031 1031 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 RPSAP52-203ENST00000622976 1023 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 AL137783.1-201ENST00000623494 1896 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 AC013726.1-201ENST00000563747 2285 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 FGD5P1-202ENST00000614866 2498 ntBASIC15.5■□□□□ 0.07
HLA-DQB2P05538 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DQB2P05538 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AL139094.1-201ENST00000405549 1188 ntBASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AP006294.1-201ENST00000415407 339 ntBASIC15.49■□□□□ 0.07
HLA-DQB2P05538 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.49■□□□□ 0.07
HLA-DQB2P05538 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms