Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCRP04035 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HMGCRP04035 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCRP04035 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCRP04035 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCRP04035 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCRP04035 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 LINC02447-202ENST00000501888 2146 ntBASIC17.12■□□□□ 0.33
HMGCRP04035 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
HMGCRP04035 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 RN7SKP214-201ENST00000364208 315 ntBASIC17.12■□□□□ 0.33
HMGCRP04035 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HMGCRP04035 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.12■□□□□ 0.33
HMGCRP04035 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCRP04035 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCRP04035 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.12■□□□□ 0.33
HMGCRP04035 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCRP04035 NAP1L6-202ENST00000641404 1222 ntBASIC17.12■□□□□ 0.33
HMGCRP04035 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMGCRP04035 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCRP04035 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCRP04035 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCRP04035 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 AL160314.3-201ENST00000556041 767 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.11■□□□□ 0.33
HMGCRP04035 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 MIR4683-201ENST00000579659 81 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 MIR4783-201ENST00000580343 82 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.11■□□□□ 0.33
HMGCRP04035 AC009955.4-201ENST00000597192 544 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 AL358472.3-201ENST00000608147 415 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HMGCRP04035 AC112504.1-201ENST00000623415 1841 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 AP000593.2-201ENST00000542775 1433 ntBASIC17.11■□□□□ 0.33
HMGCRP04035 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMGCRP04035 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCRP04035 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCRP04035 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms