Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.11■□□□□ 0.17
LMNAP02545 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.11■□□□□ 0.17
LMNAP02545 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.11■□□□□ 0.17
LMNAP02545 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.11■□□□□ 0.17
LMNAP02545 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LMNAP02545 AC009542.2-202ENST00000619004 1067 ntBASIC16.11■□□□□ 0.17
LMNAP02545 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.11■□□□□ 0.17
LMNAP02545 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.11■□□□□ 0.17
LMNAP02545 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LMNAP02545 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMNAP02545 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 AC104581.4-201ENST00000623126 3052 ntBASIC16.1■□□□□ 0.17
LMNAP02545 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 LINC01101-201ENST00000622953 1884 ntBASIC16.1■□□□□ 0.17
LMNAP02545 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.1■□□□□ 0.17
LMNAP02545 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.1■□□□□ 0.17
LMNAP02545 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.1■□□□□ 0.17
LMNAP02545 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 AL442647.2-201ENST00000429864 857 ntBASIC16.1■□□□□ 0.17
LMNAP02545 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.1■□□□□ 0.17
LMNAP02545 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 PTP4A1P2-201ENST00000546033 454 ntBASIC16.1■□□□□ 0.17
LMNAP02545 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.1■□□□□ 0.17
LMNAP02545 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.1■□□□□ 0.17
LMNAP02545 AC020765.3-201ENST00000613051 740 ntBASIC16.1■□□□□ 0.17
LMNAP02545 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LMNAP02545 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LMNAP02545 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMNAP02545 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LMNAP02545 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 AL109954.1-202ENST00000564051 2148 ntBASIC16.09■□□□□ 0.17
LMNAP02545 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 TMBIM7P-203ENST00000641617 1718 ntBASIC16.09■□□□□ 0.17
LMNAP02545 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.09■□□□□ 0.17
LMNAP02545 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 NUS1P3-201ENST00000423502 862 ntBASIC16.09■□□□□ 0.17
LMNAP02545 AC253536.4-201ENST00000440539 267 ntBASIC16.09■□□□□ 0.17
LMNAP02545 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 RN7SL399P-201ENST00000471648 279 ntBASIC16.09■□□□□ 0.17
LMNAP02545 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.09■□□□□ 0.17
LMNAP02545 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.09■□□□□ 0.17
LMNAP02545 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.09■□□□□ 0.17
LMNAP02545 AC244452.3-201ENST00000636814 210 ntBASIC16.09■□□□□ 0.17
LMNAP02545 CICP4-201ENST00000447359 2812 ntBASIC16.09■□□□□ 0.17
LMNAP02545 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms