Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CD4P01730 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 ACTG1P2-201ENST00000415776 1125 ntBASIC16.8■□□□□ 0.28
CD4P01730 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 ACTG1P11-201ENST00000425411 1125 ntBASIC16.8■□□□□ 0.28
CD4P01730 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 EEF1DP6-201ENST00000449232 372 ntBASIC16.8■□□□□ 0.28
CD4P01730 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 NUP210P1-202ENST00000504322 710 ntBASIC16.8■□□□□ 0.28
CD4P01730 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.8■□□□□ 0.28
CD4P01730 PRKXP1-201ENST00000561423 1122 ntBASIC16.8■□□□□ 0.28
CD4P01730 AC026740.1-201ENST00000607068 791 ntBASIC16.8■□□□□ 0.28
CD4P01730 AF254983.2-201ENST00000612331 135 ntBASIC16.8■□□□□ 0.28
CD4P01730 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.8■□□□□ 0.28
CD4P01730 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CD4P01730 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD4P01730 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 AC013355.1-201ENST00000562625 723 ntBASIC16.79■□□□□ 0.28
CD4P01730 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CD4P01730 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 AC127383.1-201ENST00000444697 1800 ntBASIC16.79■□□□□ 0.28
CD4P01730 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CD4P01730 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.79■□□□□ 0.28
CD4P01730 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD4P01730 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 NFIC-211ENST00000641145 8399 ntBASIC16.78■□□□□ 0.28
CD4P01730 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 LINC02199-201ENST00000506655 2702 ntBASIC16.78■□□□□ 0.28
CD4P01730 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CD4P01730 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
CD4P01730 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD4P01730 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms