Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMC2O95347 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMC2O95347 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMC2O95347 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SMC2O95347 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
SMC2O95347 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 GRK6P1-201ENST00000400595 1711 ntBASIC17.39■□□□□ 0.37
SMC2O95347 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.39■□□□□ 0.37
SMC2O95347 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SMC2O95347 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.39■□□□□ 0.37
SMC2O95347 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.39■□□□□ 0.37
SMC2O95347 AP000347.1-202ENST00000435868 847 ntBASIC17.39■□□□□ 0.37
SMC2O95347 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 LINC00628-201ENST00000628516 1289 ntBASIC17.39■□□□□ 0.37
SMC2O95347 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
SMC2O95347 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.39■□□□□ 0.37
SMC2O95347 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMC2O95347 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.39■□□□□ 0.37
SMC2O95347 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 AC254562.1-201ENST00000417586 456 ntBASIC17.38■□□□□ 0.37
SMC2O95347 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.38■□□□□ 0.37
SMC2O95347 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SMC2O95347 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.38■□□□□ 0.37
SMC2O95347 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.38■□□□□ 0.37
SMC2O95347 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 AC025048.3-201ENST00000590609 569 ntBASIC17.38■□□□□ 0.37
SMC2O95347 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 AC005702.4-201ENST00000618393 416 ntBASIC17.38■□□□□ 0.37
SMC2O95347 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SMC2O95347 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.38■□□□□ 0.37
SMC2O95347 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.38■□□□□ 0.37
SMC2O95347 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.38■□□□□ 0.37
SMC2O95347 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMC2O95347 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms