Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.75□□□□□ -0.21
CDRT1O95170 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDRT1O95170 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDRT1O95170 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.75□□□□□ -0.21
CDRT1O95170 AC011474.4-201ENST00000623523 2076 ntBASIC13.75□□□□□ -0.21
CDRT1O95170 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDRT1O95170 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.74□□□□□ -0.21
CDRT1O95170 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.74□□□□□ -0.21
CDRT1O95170 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 AC004987.2-201ENST00000395959 1148 ntBASIC13.74□□□□□ -0.21
CDRT1O95170 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.74□□□□□ -0.21
CDRT1O95170 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.74□□□□□ -0.21
CDRT1O95170 SLC25A6P4-201ENST00000586535 553 ntBASIC13.74□□□□□ -0.21
CDRT1O95170 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 AC064836.3-201ENST00000607928 673 ntBASIC13.74□□□□□ -0.21
CDRT1O95170 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CDRT1O95170 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 MST1P2-201ENST00000457982 2291 ntBASIC13.74□□□□□ -0.21
CDRT1O95170 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDRT1O95170 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.74□□□□□ -0.21
CDRT1O95170 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.73□□□□□ -0.21
CDRT1O95170 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
CDRT1O95170 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.73□□□□□ -0.21
CDRT1O95170 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.73□□□□□ -0.21
CDRT1O95170 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.73□□□□□ -0.21
CDRT1O95170 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.73□□□□□ -0.21
CDRT1O95170 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDRT1O95170 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.73□□□□□ -0.21
CDRT1O95170 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDRT1O95170 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.73□□□□□ -0.21
CDRT1O95170 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms