Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.57□□□□□ -0.24
KDM4BO94953 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.57□□□□□ -0.24
KDM4BO94953 AC004832.2-201ENST00000426397 482 ntBASIC13.57□□□□□ -0.24
KDM4BO94953 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.57□□□□□ -0.24
KDM4BO94953 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.57□□□□□ -0.24
KDM4BO94953 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.57□□□□□ -0.24
KDM4BO94953 KRT8P48-201ENST00000515599 1220 ntBASIC13.57□□□□□ -0.24
KDM4BO94953 IGHV3-62-201ENST00000520057 340 ntBASIC13.57□□□□□ -0.24
KDM4BO94953 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.57□□□□□ -0.24
KDM4BO94953 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.57□□□□□ -0.24
KDM4BO94953 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.57□□□□□ -0.24
KDM4BO94953 C20orf181-201ENST00000623918 480 ntBASIC13.57□□□□□ -0.24
KDM4BO94953 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.57□□□□□ -0.24
KDM4BO94953 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.57□□□□□ -0.24
KDM4BO94953 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.57□□□□□ -0.24
KDM4BO94953 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.57□□□□□ -0.24
KDM4BO94953 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.57□□□□□ -0.24
KDM4BO94953 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.57□□□□□ -0.24
KDM4BO94953 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDM4BO94953 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 AC140479.7-201ENST00000636301 2332 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
KDM4BO94953 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
KDM4BO94953 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDM4BO94953 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.56□□□□□ -0.24
KDM4BO94953 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.56□□□□□ -0.24
KDM4BO94953 MIR940-201ENST00000401276 94 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.56□□□□□ -0.24
KDM4BO94953 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 MKNK2P1-201ENST00000437526 628 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.56□□□□□ -0.24
KDM4BO94953 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 PGAM5P1-201ENST00000518923 814 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.56□□□□□ -0.24
KDM4BO94953 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 AC084121.4-201ENST00000641598 221 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 AF228730.8-201ENST00000642140 221 ntBASIC13.56□□□□□ -0.24
KDM4BO94953 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KDM4BO94953 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
KDM4BO94953 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDM4BO94953 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.56□□□□□ -0.24
KDM4BO94953 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.56□□□□□ -0.24
KDM4BO94953 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
KDM4BO94953 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KDM4BO94953 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
KDM4BO94953 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
KDM4BO94953 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
KDM4BO94953 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.55□□□□□ -0.24
KDM4BO94953 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms