Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST1O76090 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
BEST1O76090 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
BEST1O76090 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST1O76090 LILRP1-201ENST00000444199 1370 ntBASIC16■□□□□ 0.15
BEST1O76090 WASH3P-207ENST00000560956 1394 ntBASIC16■□□□□ 0.15
BEST1O76090 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16■□□□□ 0.15
BEST1O76090 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 LINC00528-201ENST00000600723 2160 ntBASIC16■□□□□ 0.15
BEST1O76090 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16■□□□□ 0.15
BEST1O76090 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BEST1O76090 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BEST1O76090 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BEST1O76090 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 AGAP7P-201ENST00000582299 2062 ntBASIC16■□□□□ 0.15
BEST1O76090 AGAP14-201ENST00000624701 2060 ntBASIC16■□□□□ 0.15
BEST1O76090 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 HLA-V-201ENST00000429037 534 ntBASIC16■□□□□ 0.15
BEST1O76090 CSF2RBP1-201ENST00000447905 391 ntBASIC16■□□□□ 0.15
BEST1O76090 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 RNA5SP486-201ENST00000515961 83 ntBASIC16■□□□□ 0.15
BEST1O76090 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
BEST1O76090 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16■□□□□ 0.15
BEST1O76090 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16■□□□□ 0.15
BEST1O76090 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BEST1O76090 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
BEST1O76090 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BEST1O76090 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16■□□□□ 0.15
BEST1O76090 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST1O76090 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BEST1O76090 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 DBET-201ENST00000630918 3363 ntBASIC15.99■□□□□ 0.15
BEST1O76090 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BEST1O76090 AC006001.1-201ENST00000325130 474 ntBASIC15.99■□□□□ 0.15
BEST1O76090 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.99■□□□□ 0.15
BEST1O76090 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 POM121L8P-201ENST00000417732 1281 ntBASIC15.99■□□□□ 0.15
BEST1O76090 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST1O76090 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.99■□□□□ 0.15
BEST1O76090 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.99■□□□□ 0.15
BEST1O76090 POM121L9P-203ENST00000441984 1285 ntBASIC15.99■□□□□ 0.15
BEST1O76090 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.99■□□□□ 0.15
BEST1O76090 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.99■□□□□ 0.15
BEST1O76090 RN7SL48P-201ENST00000579283 293 ntBASIC15.99■□□□□ 0.15
BEST1O76090 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms