Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.45■□□□□ 0.06
GPC4O75487 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GPC4O75487 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GPC4O75487 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.44■□□□□ 0.06
GPC4O75487 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.44■□□□□ 0.06
GPC4O75487 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.44■□□□□ 0.06
GPC4O75487 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 AC009090.5-201ENST00000624886 2285 ntBASIC15.44■□□□□ 0.06
GPC4O75487 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 TOMM22P5-201ENST00000416399 439 ntBASIC15.44■□□□□ 0.06
GPC4O75487 KRT18P64-201ENST00000434946 1219 ntBASIC15.44■□□□□ 0.06
GPC4O75487 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.44■□□□□ 0.06
GPC4O75487 AL512638.1-201ENST00000457493 794 ntBASIC15.44■□□□□ 0.06
GPC4O75487 RNA5SP421-201ENST00000516864 134 ntBASIC15.44■□□□□ 0.06
GPC4O75487 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 AC092337.1-201ENST00000568699 1129 ntBASIC15.44■□□□□ 0.06
GPC4O75487 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.44■□□□□ 0.06
GPC4O75487 AC004461.2-201ENST00000629517 803 ntBASIC15.44■□□□□ 0.06
GPC4O75487 AC004840.1-201ENST00000636359 365 ntBASIC15.44■□□□□ 0.06
GPC4O75487 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 AF228730.6-201ENST00000641497 218 ntBASIC15.44■□□□□ 0.06
GPC4O75487 AC084121.3-201ENST00000641716 218 ntBASIC15.44■□□□□ 0.06
GPC4O75487 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GPC4O75487 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
GPC4O75487 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
GPC4O75487 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 AC015922.1-201ENST00000421102 1152 ntBASIC15.43■□□□□ 0.06
GPC4O75487 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.43■□□□□ 0.06
GPC4O75487 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.43■□□□□ 0.06
GPC4O75487 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.43■□□□□ 0.06
GPC4O75487 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.43■□□□□ 0.06
GPC4O75487 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.43■□□□□ 0.06
GPC4O75487 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GPC4O75487 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms