Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 AC011477.6-201ENST00000604980 1927 ntBASIC6.63□□□□□ -1.35
USH2AO75445 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USH2AO75445 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC6.63□□□□□ -1.35
USH2AO75445 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 RPS23-204ENST00000507980 836 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 CSTP2-201ENST00000610599 398 ntBASIC6.63□□□□□ -1.35
USH2AO75445 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AL137783.1-201ENST00000623494 1896 ntBASIC6.63□□□□□ -1.35
USH2AO75445 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC6.63□□□□□ -1.35
USH2AO75445 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC6.63□□□□□ -1.35
USH2AO75445 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC6.63□□□□□ -1.35
USH2AO75445 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC6.63□□□□□ -1.35
USH2AO75445 MIR3188-201ENST00000583494 85 ntBASIC6.63□□□□□ -1.35
USH2AO75445 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USH2AO75445 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 PCDHB19P-201ENST00000570871 2371 ntBASIC6.63□□□□□ -1.35
USH2AO75445 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USH2AO75445 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC6.63□□□□□ -1.35
USH2AO75445 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 ZBTB45P1-201ENST00000452761 1456 ntBASIC6.63□□□□□ -1.35
USH2AO75445 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AC020763.4-201ENST00000623414 4170 ntBASIC6.63□□□□□ -1.35
USH2AO75445 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
USH2AO75445 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 AC098657.1-201ENST00000416270 1135 ntBASIC6.63□□□□□ -1.35
USH2AO75445 HNRNPA1P25-201ENST00000422644 937 ntBASIC6.63□□□□□ -1.35
USH2AO75445 COQ4-204ENST00000608951 781 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC6.63□□□□□ -1.35
USH2AO75445 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 AC018629.1-201ENST00000623381 1736 ntBASIC6.62□□□□□ -1.35
USH2AO75445 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
USH2AO75445 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 AC005915.1-201ENST00000624912 2018 ntBASIC6.62□□□□□ -1.35
USH2AO75445 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms