Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH4O75427 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH4O75427 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH4O75427 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH4O75427 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH4O75427 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH4O75427 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH4O75427 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 AL137783.1-201ENST00000623494 1896 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 C1QBPP1-201ENST00000400117 770 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH4O75427 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH4O75427 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH4O75427 AC002472.2-201ENST00000442739 958 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH4O75427 AL359711.2-201ENST00000563105 872 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRCH4O75427 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 SPDYE22P-201ENST00000582158 798 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 AC004233.3-201ENST00000607794 1269 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 PRSS30P-206ENST00000641773 873 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 KRT8P22-201ENST00000562317 1415 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRCH4O75427 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH4O75427 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRCH4O75427 MTHFR-210ENST00000641407 2387 ntBASIC15.91■□□□□ 0.14
LRCH4O75427 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH4O75427 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 AC018442.1-201ENST00000421439 2061 ntBASIC15.9■□□□□ 0.14
LRCH4O75427 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRCH4O75427 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.9■□□□□ 0.14
LRCH4O75427 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.9■□□□□ 0.14
LRCH4O75427 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.9■□□□□ 0.14
LRCH4O75427 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 API5-211ENST00000534695 560 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
LRCH4O75427 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.9■□□□□ 0.14
LRCH4O75427 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH4O75427 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LRCH4O75427 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH4O75427 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms