Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PEX1O43933 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.06■□□□□ 0
PEX1O43933 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PEX1O43933 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PEX1O43933 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PEX1O43933 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.06■□□□□ 0
PEX1O43933 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.05■□□□□ 0
PEX1O43933 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PEX1O43933 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.05■□□□□ 0
PEX1O43933 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.05■□□□□ 0
PEX1O43933 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.05■□□□□ 0
PEX1O43933 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.05■□□□□ 0
PEX1O43933 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.05■□□□□ 0
PEX1O43933 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PEX1O43933 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.05■□□□□ 0
PEX1O43933 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PEX1O43933 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.05■□□□□ -0
PEX1O43933 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.05■□□□□ -0
PEX1O43933 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.05■□□□□ -0
PEX1O43933 RARRES2P9-201ENST00000565168 469 ntBASIC15.05■□□□□ -0
PEX1O43933 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.05■□□□□ -0
PEX1O43933 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.05■□□□□ -0
PEX1O43933 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.05■□□□□ -0
PEX1O43933 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.05■□□□□ -0
PEX1O43933 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.05■□□□□ -0
PEX1O43933 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.05■□□□□ -0
PEX1O43933 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.05■□□□□ -0
PEX1O43933 AC073439.1-201ENST00000624121 1774 ntBASIC15.05■□□□□ -0
PEX1O43933 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.05■□□□□ -0
PEX1O43933 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
PEX1O43933 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PEX1O43933 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 AL928921.2-201ENST00000641325 2442 ntBASIC15.04■□□□□ -0
PEX1O43933 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.04■□□□□ -0
PEX1O43933 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.04■□□□□ -0
PEX1O43933 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PEX1O43933 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 FO538757.1-201ENST00000623083 1397 ntBASIC15.04■□□□□ -0
PEX1O43933 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PEX1O43933 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PEX1O43933 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.04■□□□□ -0
PEX1O43933 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 TREML5P-201ENST00000421694 576 ntBASIC15.04■□□□□ -0
PEX1O43933 BASP1P1-201ENST00000430708 665 ntBASIC15.04■□□□□ -0
PEX1O43933 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.04■□□□□ -0
PEX1O43933 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.04■□□□□ -0
PEX1O43933 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 IGHV3-42-201ENST00000520410 361 ntBASIC15.04■□□□□ -0
PEX1O43933 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.04■□□□□ -0
PEX1O43933 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.04■□□□□ -0
PEX1O43933 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.04■□□□□ -0
PEX1O43933 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.04■□□□□ -0
PEX1O43933 AC003101.2-201ENST00000612557 442 ntBASIC15.04■□□□□ -0
PEX1O43933 AC018529.1-201ENST00000613063 361 ntBASIC15.04■□□□□ -0
PEX1O43933 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PEX1O43933 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PEX1O43933 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.04■□□□□ -0
PEX1O43933 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.04■□□□□ -0
PEX1O43933 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms