Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TMEM261P1-201ENST00000604899 340 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC093813.1-201ENST00000605066 256 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.67□□□□□ -0.22
TRAF3IP2O43734 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF3IP2O43734 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 MYCLP2-201ENST00000449268 967 ntBASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 ELK1P1-201ENST00000485699 580 ntBASIC13.66□□□□□ -0.22
TRAF3IP2O43734 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF3IP2O43734 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 C1QBPP1-201ENST00000400117 770 ntBASIC13.65□□□□□ -0.22
TRAF3IP2O43734 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms