Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TO15178 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.13□□□□□ -0.15
TO15178 AL139094.1-201ENST00000405549 1188 ntBASIC14.13□□□□□ -0.15
TO15178 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TO15178 COX5BP8-201ENST00000416911 349 ntBASIC14.13□□□□□ -0.15
TO15178 NME2P1-201ENST00000426182 414 ntBASIC14.13□□□□□ -0.15
TO15178 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 CR383656.12-201ENST00000549567 513 ntBASIC14.13□□□□□ -0.15
TO15178 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.13□□□□□ -0.15
TO15178 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.13□□□□□ -0.15
TO15178 RPSAP52-203ENST00000622976 1023 ntBASIC14.13□□□□□ -0.15
TO15178 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TO15178 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TO15178 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TO15178 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 AP000845.1-201ENST00000581677 2131 ntBASIC14.12□□□□□ -0.15
TO15178 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TO15178 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.12□□□□□ -0.15
TO15178 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.12□□□□□ -0.15
TO15178 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TO15178 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TO15178 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
TO15178 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.12□□□□□ -0.15
TO15178 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.12□□□□□ -0.15
TO15178 AC093433.1-201ENST00000458048 571 ntBASIC14.12□□□□□ -0.15
TO15178 RN7SL837P-201ENST00000463010 287 ntBASIC14.12□□□□□ -0.15
TO15178 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 AC022137.2-201ENST00000503482 481 ntBASIC14.12□□□□□ -0.15
TO15178 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.12□□□□□ -0.15
TO15178 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 AC005225.4-201ENST00000557330 545 ntBASIC14.12□□□□□ -0.15
TO15178 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.12□□□□□ -0.15
TO15178 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.12□□□□□ -0.15
TO15178 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.12□□□□□ -0.15
TO15178 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TO15178 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TO15178 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TO15178 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.12□□□□□ -0.15
TO15178 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TO15178 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms