Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHD1O14646 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC23.82■■□□□ 1.4
CHD1O14646 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 RN7SL288P-201ENST00000490496 291 ntBASIC23.82■■□□□ 1.4
CHD1O14646 AC095040.1-201ENST00000513286 675 ntBASIC23.82■■□□□ 1.4
CHD1O14646 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 KRT8P2-201ENST00000556193 944 ntBASIC23.82■■□□□ 1.4
CHD1O14646 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 WASH3P-207ENST00000560956 1394 ntBASIC23.82■■□□□ 1.4
CHD1O14646 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
CHD1O14646 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD1O14646 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD1O14646 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC23.81■■□□□ 1.4
CHD1O14646 NT5C-204ENST00000578337 582 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD1O14646 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC23.81■■□□□ 1.4
CHD1O14646 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CHD1O14646 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC23.81■■□□□ 1.4
CHD1O14646 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD1O14646 AC018638.5-201ENST00000450885 754 ntBASIC23.81■■□□□ 1.4
CHD1O14646 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC23.81■■□□□ 1.4
CHD1O14646 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD1O14646 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CHD1O14646 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD1O14646 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 SALL4P5-201ENST00000419001 1760 ntBASIC23.8■■□□□ 1.4
CHD1O14646 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 RNVU1-8-201ENST00000364272 125 ntBASIC23.8■■□□□ 1.4
CHD1O14646 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC23.8■■□□□ 1.4
CHD1O14646 RN7SL846P-201ENST00000467429 292 ntBASIC23.8■■□□□ 1.4
CHD1O14646 FOXN3-AS2-201ENST00000554071 1262 ntBASIC23.8■■□□□ 1.4
CHD1O14646 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC23.8■■□□□ 1.4
CHD1O14646 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.8■■□□□ 1.4
CHD1O14646 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CHD1O14646 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD1O14646 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD1O14646 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CHD1O14646 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 AC092570.1-201ENST00000414446 469 ntBASIC23.79■■□□□ 1.4
CHD1O14646 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC23.79■■□□□ 1.4
CHD1O14646 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC23.79■■□□□ 1.4
CHD1O14646 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 AL133373.2-201ENST00000623187 2828 ntBASIC23.79■■□□□ 1.4
CHD1O14646 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHD1O14646 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CHD1O14646 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 AL157823.1-201ENST00000403727 628 ntBASIC23.79■■□□□ 1.4
CHD1O14646 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 RN7SL147P-201ENST00000487345 298 ntBASIC23.79■■□□□ 1.4
CHD1O14646 ALG1L7P-201ENST00000502317 768 ntBASIC23.79■■□□□ 1.4
CHD1O14646 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms