Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AF238378.1-201ENST00000526806 358 ntBASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AL121772.3-201ENST00000610840 674 ntBASIC11.27□□□□□ -0.61
SMKR1H3BMG3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AC011474.4-201ENST00000623523 2076 ntBASIC11.27□□□□□ -0.61
SMKR1H3BMG3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SMKR1H3BMG3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC084364.1-201ENST00000551967 1556 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SAPCD2P3-201ENST00000455031 850 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC073648.2-201ENST00000510116 352 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC012640.2-201ENST00000561606 901 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AL358472.4-201ENST00000633140 710 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 DGCR9-201ENST00000609630 2415 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 KRT8P37-201ENST00000451609 1420 ntBASIC11.26□□□□□ -0.61
SMKR1H3BMG3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.26□□□□□ -0.61
SMKR1H3BMG3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.25□□□□□ -0.61
SMKR1H3BMG3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SMKR1H3BMG3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMKR1H3BMG3 AC099521.3-201ENST00000624251 2938 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms