Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 POM121L8P-201ENST00000417732 1281 ntBASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 POM121L9P-203ENST00000441984 1285 ntBASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 RN7SL713P-201ENST00000582127 302 ntBASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3BA6NDS4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 KRT8P4-201ENST00000509735 1454 ntBASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 AC084346.2-201ENST00000607097 949 ntBASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3BA6NDS4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 AC105250.1-201ENST00000509378 2057 ntBASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3BA6NDS4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms