Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 AC005252.3-201ENST00000623855 2258 ntBASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SPDYE17-201ENST00000412399 783 ntBASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUXBA0A1W2PPF3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AL353705.2-201ENST00000428243 662 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 IGHV3-62-201ENST00000520057 340 ntBASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
DUXBA0A1W2PPF3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms