Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AL031284.1-201ENST00000419297 478 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC142381.1-201ENST00000426099 345 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC112191.1-201ENST00000523689 701 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AP002472.1-201ENST00000577490 586 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AL773604.1-201ENST00000617417 272 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC008267.7-201ENST00000624570 1194 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 AC092135.3-201ENST00000624151 1846 ntBASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV18A0A075B6X5 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 AC074386.1-202ENST00000463561 864 ntBASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 AC099522.2-201ENST00000607001 744 ntBASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms