Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 AC005703.6-201ENST00000623265 1329 ntBASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 AC096631.2-201ENST00000436136 790 ntBASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 AC131274.2-201ENST00000580697 1507 ntBASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.86■■□□□ 1.25
HS3ST3A1Q9Y663 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
HS3ST3A1Q9Y663 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.84■■□□□ 1.25
HS3ST3A1Q9Y663 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HS3ST3A1Q9Y663 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HS3ST3A1Q9Y663 AC133561.4-201ENST00000566112 224 ntBASIC22.83■■□□□ 1.25
HS3ST3A1Q9Y663 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.83■■□□□ 1.25
HS3ST3A1Q9Y663 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
HS3ST3A1Q9Y663 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HS3ST3A1Q9Y663 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 AL022069.1-201ENST00000568025 1636 ntBASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
HS3ST3A1Q9Y663 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HS3ST3A1Q9Y663 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HS3ST3A1Q9Y663 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
HS3ST3A1Q9Y663 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
HS3ST3A1Q9Y663 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 AC005837.3-201ENST00000612163 286 ntBASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HS3ST3A1Q9Y663 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 SRD5A1P1-201ENST00000442297 786 ntBASIC22.78■■□□□ 1.24
HS3ST3A1Q9Y663 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.77■■□□□ 1.24
HS3ST3A1Q9Y663 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.76■■□□□ 1.23
HS3ST3A1Q9Y663 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 AC106739.1-201ENST00000617035 715 ntBASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HS3ST3A1Q9Y663 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HS3ST3A1Q9Y663 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HS3ST3A1Q9Y663 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms