Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA4Q9Y5G9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA4Q9Y5G9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDHGA4Q9Y5G9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA4Q9Y5G9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 MIR638-201ENST00000385237 100 ntBASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA4Q9Y5G9 AC020928.2-201ENST00000588717 2197 ntBASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 KRT18P24-201ENST00000344739 1156 ntBASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 TSPY9P-201ENST00000440215 945 ntBASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 TSPY11P-201ENST00000442607 1045 ntBASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGA4Q9Y5G9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGA4Q9Y5G9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA4Q9Y5G9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
PCDHGA4Q9Y5G9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGA4Q9Y5G9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA4Q9Y5G9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 AC137630.3-201ENST00000607245 391 ntBASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA4Q9Y5G9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA4Q9Y5G9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA4Q9Y5G9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 AC021242.3-201ENST00000607598 1377 ntBASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 AL139246.5-201ENST00000606645 996 ntBASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA4Q9Y5G9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms