Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.86■■□□□ 1.09
LHX6Q9UPM6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LHX6Q9UPM6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.86■■□□□ 1.09
LHX6Q9UPM6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 AF131216.4-201ENST00000638924 1588 ntBASIC21.85■■□□□ 1.09
LHX6Q9UPM6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LHX6Q9UPM6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 AC092171.4-201ENST00000609130 632 ntBASIC21.84■■□□□ 1.09
LHX6Q9UPM6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LHX6Q9UPM6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 AC142472.1-201ENST00000612013 1741 ntBASIC21.83■■□□□ 1.09
LHX6Q9UPM6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.83■■□□□ 1.09
LHX6Q9UPM6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LHX6Q9UPM6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LHX6Q9UPM6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.82■■□□□ 1.08
LHX6Q9UPM6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.82■■□□□ 1.08
LHX6Q9UPM6 AL031602.1-201ENST00000633169 911 ntBASIC21.82■■□□□ 1.08
LHX6Q9UPM6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.82■■□□□ 1.08
LHX6Q9UPM6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L2-201ENST00000561772 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 SNX5-217ENST00000606557 1087 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L6-201ENST00000626483 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L1-201ENST00000627662 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L8-201ENST00000629013 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L3-201ENST00000630187 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L7-201ENST00000630678 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DUX4L5-201ENST00000630834 1275 ntBASIC21.81■■□□□ 1.08
LHX6Q9UPM6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LHX6Q9UPM6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 YBX1P1-201ENST00000445822 960 ntBASIC21.8■■□□□ 1.08
LHX6Q9UPM6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LHX6Q9UPM6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LHX6Q9UPM6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LHX6Q9UPM6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LHX6Q9UPM6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 SERBP1P1-201ENST00000396021 1160 ntBASIC21.77■■□□□ 1.08
LHX6Q9UPM6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.77■■□□□ 1.08
LHX6Q9UPM6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.77■■□□□ 1.07
LHX6Q9UPM6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LHX6Q9UPM6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.76■■□□□ 1.07
LHX6Q9UPM6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
LHX6Q9UPM6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms