Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 GUSBP5-201ENST00000418136 578 ntBASIC19.42■□□□□ 0.7
CLN8Q9UBY8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 MIR4787-201ENST00000607364 84 ntBASIC19.42■□□□□ 0.7
CLN8Q9UBY8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLN8Q9UBY8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.41■□□□□ 0.7
CLN8Q9UBY8 MIR6089-201ENST00000616698 64 ntBASIC19.41■□□□□ 0.7
CLN8Q9UBY8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
CLN8Q9UBY8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLN8Q9UBY8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLN8Q9UBY8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLN8Q9UBY8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 AC021242.3-201ENST00000607598 1377 ntBASIC19.38■□□□□ 0.69
CLN8Q9UBY8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.38■□□□□ 0.69
CLN8Q9UBY8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLN8Q9UBY8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLN8Q9UBY8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLN8Q9UBY8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLN8Q9UBY8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms