Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL20A1Q9P218 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL20A1Q9P218 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL20A1Q9P218 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL20A1Q9P218 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
COL20A1Q9P218 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL20A1Q9P218 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL20A1Q9P218 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL20A1Q9P218 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL20A1Q9P218 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.38■■□□□ 1.81
COL20A1Q9P218 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.38■■□□□ 1.81
COL20A1Q9P218 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.38■■□□□ 1.81
COL20A1Q9P218 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL20A1Q9P218 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL20A1Q9P218 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
COL20A1Q9P218 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.37■■□□□ 1.81
COL20A1Q9P218 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL20A1Q9P218 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL20A1Q9P218 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
COL20A1Q9P218 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.37■■□□□ 1.81
COL20A1Q9P218 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.37■■□□□ 1.81
COL20A1Q9P218 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL20A1Q9P218 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
COL20A1Q9P218 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL20A1Q9P218 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL20A1Q9P218 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
COL20A1Q9P218 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
COL20A1Q9P218 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
COL20A1Q9P218 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.35■■□□□ 1.81
COL20A1Q9P218 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL20A1Q9P218 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
COL20A1Q9P218 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL20A1Q9P218 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL20A1Q9P218 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL20A1Q9P218 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.34■■□□□ 1.81
COL20A1Q9P218 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL20A1Q9P218 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL20A1Q9P218 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL20A1Q9P218 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.33■■□□□ 1.81
COL20A1Q9P218 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.33■■□□□ 1.81
COL20A1Q9P218 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL20A1Q9P218 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL20A1Q9P218 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
COL20A1Q9P218 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL20A1Q9P218 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL20A1Q9P218 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
COL20A1Q9P218 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.32■■□□□ 1.8
COL20A1Q9P218 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL20A1Q9P218 AC019069.1-201ENST00000610008 1333 ntBASIC26.32■■□□□ 1.8
COL20A1Q9P218 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL20A1Q9P218 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.32■■□□□ 1.8
COL20A1Q9P218 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.31■■□□□ 1.8
COL20A1Q9P218 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL20A1Q9P218 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL20A1Q9P218 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.31■■□□□ 1.8
COL20A1Q9P218 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL20A1Q9P218 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL20A1Q9P218 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.31■■□□□ 1.8
COL20A1Q9P218 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL20A1Q9P218 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
COL20A1Q9P218 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.31■■□□□ 1.8
COL20A1Q9P218 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL20A1Q9P218 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL20A1Q9P218 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.3■■□□□ 1.8
COL20A1Q9P218 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.3■■□□□ 1.8
COL20A1Q9P218 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.3■■□□□ 1.8
COL20A1Q9P218 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL20A1Q9P218 AC022211.4-201ENST00000625094 2161 ntBASIC26.3■■□□□ 1.8
COL20A1Q9P218 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL20A1Q9P218 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL20A1Q9P218 HLA-L-211ENST00000482052 1765 ntBASIC26.29■■□□□ 1.8
COL20A1Q9P218 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL20A1Q9P218 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL20A1Q9P218 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.29■■□□□ 1.8
COL20A1Q9P218 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL20A1Q9P218 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL20A1Q9P218 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL20A1Q9P218 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
COL20A1Q9P218 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL20A1Q9P218 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL20A1Q9P218 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL20A1Q9P218 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL20A1Q9P218 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
COL20A1Q9P218 AC110285.6-201ENST00000617652 491 ntBASIC26.27■■□□□ 1.8
COL20A1Q9P218 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms