Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
COMMD9Q9P000 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD9Q9P000 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COMMD9Q9P000 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD9Q9P000 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD9Q9P000 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD9Q9P000 ZNRF2P2-203ENST00000454624 420 ntBASIC19.55■□□□□ 0.72
COMMD9Q9P000 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
COMMD9Q9P000 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.54■□□□□ 0.72
COMMD9Q9P000 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
COMMD9Q9P000 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD9Q9P000 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD9Q9P000 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD9Q9P000 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD9Q9P000 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD9Q9P000 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COMMD9Q9P000 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
COMMD9Q9P000 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
COMMD9Q9P000 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
COMMD9Q9P000 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD9Q9P000 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD9Q9P000 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD9Q9P000 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.52■□□□□ 0.71
COMMD9Q9P000 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD9Q9P000 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD9Q9P000 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COMMD9Q9P000 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COMMD9Q9P000 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD9Q9P000 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD9Q9P000 AC004812.2-201ENST00000611079 2094 ntBASIC19.51■□□□□ 0.71
COMMD9Q9P000 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.51■□□□□ 0.71
COMMD9Q9P000 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.51■□□□□ 0.71
COMMD9Q9P000 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD9Q9P000 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.51■□□□□ 0.71
COMMD9Q9P000 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COMMD9Q9P000 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.5■□□□□ 0.71
COMMD9Q9P000 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD9Q9P000 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.5■□□□□ 0.71
COMMD9Q9P000 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD9Q9P000 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD9Q9P000 SLC6A10P-202ENST00000431994 2058 ntBASIC19.5■□□□□ 0.71
COMMD9Q9P000 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.49■□□□□ 0.71
COMMD9Q9P000 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.49■□□□□ 0.71
COMMD9Q9P000 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.49■□□□□ 0.71
COMMD9Q9P000 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 ABCB10P4-201ENST00000566803 2184 ntBASIC19.49■□□□□ 0.71
COMMD9Q9P000 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD9Q9P000 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 CR559946.2-201ENST00000623684 991 ntBASIC19.48■□□□□ 0.71
COMMD9Q9P000 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COMMD9Q9P000 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD9Q9P000 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms