Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.15■□□□□ 0.98
SDHAF3Q9NRP4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 AL161729.1-201ENST00000604104 1402 ntBASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 AC021242.3-201ENST00000607598 1377 ntBASIC21.14■□□□□ 0.98
SDHAF3Q9NRP4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SDHAF3Q9NRP4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHAF3Q9NRP4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAF3Q9NRP4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHAF3Q9NRP4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
SDHAF3Q9NRP4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAF3Q9NRP4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 AL022069.1-201ENST00000568025 1636 ntBASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 MIR4787-201ENST00000607364 84 ntBASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDHAF3Q9NRP4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDHAF3Q9NRP4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
SDHAF3Q9NRP4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SDHAF3Q9NRP4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDHAF3Q9NRP4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDHAF3Q9NRP4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDHAF3Q9NRP4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDHAF3Q9NRP4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SDHAF3Q9NRP4 AC141586.4-201ENST00000624558 1573 ntBASIC21.08■□□□□ 0.97
SDHAF3Q9NRP4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDHAF3Q9NRP4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDHAF3Q9NRP4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 AC092028.1-203ENST00000608262 953 ntBASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.07■□□□□ 0.96
SDHAF3Q9NRP4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.06■□□□□ 0.96
SDHAF3Q9NRP4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.05■□□□□ 0.96
SDHAF3Q9NRP4 AC004448.1-201ENST00000458332 883 ntBASIC21.05■□□□□ 0.96
SDHAF3Q9NRP4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.05■□□□□ 0.96
SDHAF3Q9NRP4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SDHAF3Q9NRP4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDHAF3Q9NRP4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 AL139125.2-201ENST00000623134 1869 ntBASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDHAF3Q9NRP4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms