Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB16Q9NRJ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB16Q9NRJ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB16Q9NRJ7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 RNF126P1-201ENST00000567452 1320 ntBASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB16Q9NRJ7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHB16Q9NRJ7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PCDHB16Q9NRJ7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB16Q9NRJ7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB16Q9NRJ7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB16Q9NRJ7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB16Q9NRJ7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB16Q9NRJ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 HSD17B1P1-201ENST00000590052 955 ntBASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB16Q9NRJ7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 AC133552.2-201ENST00000619106 1032 ntBASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB16Q9NRJ7 HLA-L-211ENST00000482052 1765 ntBASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms