Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM1Q9HBL6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.16■■□□□ 1.14
LRTM1Q9HBL6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 DUSP8P5-201ENST00000422884 1815 ntBASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 LONRF2P2-201ENST00000439212 571 ntBASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRTM1Q9HBL6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
LRTM1Q9HBL6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.14■■□□□ 1.14
LRTM1Q9HBL6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
LRTM1Q9HBL6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
LRTM1Q9HBL6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM1Q9HBL6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM1Q9HBL6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM1Q9HBL6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
LRTM1Q9HBL6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 KRT18P60-201ENST00000312876 1297 ntBASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM1Q9HBL6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LRTM1Q9HBL6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
LRTM1Q9HBL6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRTM1Q9HBL6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRTM1Q9HBL6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.11■■□□□ 1.13
LRTM1Q9HBL6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRTM1Q9HBL6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM1Q9HBL6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 AC133561.1-201ENST00000568600 2415 ntBASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.09■■□□□ 1.13
LRTM1Q9HBL6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 AL161729.1-201ENST00000604104 1402 ntBASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.08■■□□□ 1.13
LRTM1Q9HBL6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms