Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG1Q9H6L5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.66■■□□□ 1.38
RETREG1Q9H6L5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RETREG1Q9H6L5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RETREG1Q9H6L5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RETREG1Q9H6L5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
RETREG1Q9H6L5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.64■■□□□ 1.37
RETREG1Q9H6L5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.64■■□□□ 1.37
RETREG1Q9H6L5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.64■■□□□ 1.37
RETREG1Q9H6L5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETREG1Q9H6L5 LINC00543-201ENST00000567234 1845 ntBASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG1Q9H6L5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 AL139125.2-201ENST00000623134 1869 ntBASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.62■■□□□ 1.37
RETREG1Q9H6L5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.61■■□□□ 1.37
RETREG1Q9H6L5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG1Q9H6L5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG1Q9H6L5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 UNC93B8-201ENST00000511903 705 ntBASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 MTDHP2-201ENST00000601468 714 ntBASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 AC010997.5-201ENST00000609182 354 ntBASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG1Q9H6L5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
RETREG1Q9H6L5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RETREG1Q9H6L5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG1Q9H6L5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms