Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SPTBN4Q9H254 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.61■■□□□ 1.21
SPTBN4Q9H254 AC006015.1-201ENST00000429970 570 ntBASIC22.61■■□□□ 1.21
SPTBN4Q9H254 AL109923.1-201ENST00000618799 583 ntBASIC22.61■■□□□ 1.21
SPTBN4Q9H254 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.61■■□□□ 1.21
SPTBN4Q9H254 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SPTBN4Q9H254 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 AC005703.6-201ENST00000623265 1329 ntBASIC22.6■■□□□ 1.21
SPTBN4Q9H254 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.6■■□□□ 1.21
SPTBN4Q9H254 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
SPTBN4Q9H254 AC016769.1-201ENST00000409132 1010 ntBASIC22.59■■□□□ 1.21
SPTBN4Q9H254 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.59■■□□□ 1.21
SPTBN4Q9H254 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.59■■□□□ 1.21
SPTBN4Q9H254 ST7-AS1-201ENST00000456775 1889 ntBASIC22.59■■□□□ 1.21
SPTBN4Q9H254 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPTBN4Q9H254 AC073111.5-205ENST00000641717 521 ntBASIC22.58■■□□□ 1.21
SPTBN4Q9H254 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.58■■□□□ 1.2
SPTBN4Q9H254 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPTBN4Q9H254 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPTBN4Q9H254 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.57■■□□□ 1.2
SPTBN4Q9H254 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SPTBN4Q9H254 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.57■■□□□ 1.2
SPTBN4Q9H254 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.56■■□□□ 1.2
SPTBN4Q9H254 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.56■■□□□ 1.2
SPTBN4Q9H254 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.56■■□□□ 1.2
SPTBN4Q9H254 AC099791.2-201ENST00000605725 427 ntBASIC22.56■■□□□ 1.2
SPTBN4Q9H254 BX842568.3-201ENST00000418104 571 ntBASIC22.56■■□□□ 1.2
SPTBN4Q9H254 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.56■■□□□ 1.2
SPTBN4Q9H254 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.56■■□□□ 1.2
SPTBN4Q9H254 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPTBN4Q9H254 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 BX255925.1-201ENST00000566954 1854 ntBASIC22.55■■□□□ 1.2
SPTBN4Q9H254 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.55■■□□□ 1.2
SPTBN4Q9H254 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SPTBN4Q9H254 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTBN4Q9H254 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTBN4Q9H254 AL139393.2-201ENST00000608721 2025 ntBASIC22.53■■□□□ 1.2
SPTBN4Q9H254 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPTBN4Q9H254 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTBN4Q9H254 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPTBN4Q9H254 AC092171.4-201ENST00000609130 632 ntBASIC22.53■■□□□ 1.2
SPTBN4Q9H254 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTBN4Q9H254 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 AC006970.2-201ENST00000450065 779 ntBASIC22.52■■□□□ 1.2
SPTBN4Q9H254 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 AC087239.1-201ENST00000622671 572 ntBASIC22.52■■□□□ 1.2
SPTBN4Q9H254 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTBN4Q9H254 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTBN4Q9H254 TSPY26P-201ENST00000476365 1326 ntBASIC22.51■■□□□ 1.19
SPTBN4Q9H254 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.5■■□□□ 1.19
SPTBN4Q9H254 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SPTBN4Q9H254 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms