Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TM6SF1Q9BZW5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TM6SF1Q9BZW5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TM6SF1Q9BZW5 AC074183.2-201ENST00000623112 922 ntBASIC27.39■■□□□ 1.98
TM6SF1Q9BZW5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.39■■□□□ 1.97
TM6SF1Q9BZW5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
TM6SF1Q9BZW5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
TM6SF1Q9BZW5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TM6SF1Q9BZW5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
TM6SF1Q9BZW5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 TSPY13P-201ENST00000338964 914 ntBASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 PVT1_1.1-201ENST00000615125 194 ntBASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
TM6SF1Q9BZW5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TM6SF1Q9BZW5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.33■■□□□ 1.97
TM6SF1Q9BZW5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.33■■□□□ 1.97
TM6SF1Q9BZW5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TM6SF1Q9BZW5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TM6SF1Q9BZW5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.31■■□□□ 1.96
TM6SF1Q9BZW5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TM6SF1Q9BZW5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 BHLHE23-202ENST00000612929 1109 ntBASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 AL022069.1-201ENST00000568025 1636 ntBASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TM6SF1Q9BZW5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.28■■□□□ 1.96
TM6SF1Q9BZW5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
TM6SF1Q9BZW5 AC131274.2-201ENST00000580697 1507 ntBASIC27.28■■□□□ 1.96
TM6SF1Q9BZW5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TM6SF1Q9BZW5 AC120024.1-201ENST00000562672 995 ntBASIC27.28■■□□□ 1.96
TM6SF1Q9BZW5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.27■■□□□ 1.96
TM6SF1Q9BZW5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TM6SF1Q9BZW5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TM6SF1Q9BZW5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms