Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-1Q9BYR8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 AC233723.2-201ENST00000623798 2106 ntBASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 ABHD17AP4-201ENST00000411545 909 ntBASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 ANOS2P-203ENST00000472227 1816 ntBASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-1Q9BYR8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 RP9P-202ENST00000450133 1212 ntBASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.73□□□□□ -0.53
KRTAP3-1Q9BYR8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 AC093536.1-201ENST00000569153 554 ntBASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KRTAP3-1Q9BYR8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 C1orf229-201ENST00000623686 2258 ntBASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 ECEL1P2-201ENST00000461596 1295 ntBASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KRTAP3-1Q9BYR8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 LINC00565-201ENST00000562710 2331 ntBASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
KRTAP3-1Q9BYR8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 DUSP8P3-201ENST00000399571 1760 ntBASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-1Q9BYR8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-1Q9BYR8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-1Q9BYR8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-1Q9BYR8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms