Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF4Q9BSR8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
YIPF4Q9BSR8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.06
YIPF4Q9BSR8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YIPF4Q9BSR8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
YIPF4Q9BSR8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.64■■□□□ 1.05
YIPF4Q9BSR8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF4Q9BSR8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF4Q9BSR8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 AC019171.1-201ENST00000601251 1056 ntBASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF4Q9BSR8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF4Q9BSR8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
YIPF4Q9BSR8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF4Q9BSR8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.58■■□□□ 1.05
YIPF4Q9BSR8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
YIPF4Q9BSR8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF4Q9BSR8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
YIPF4Q9BSR8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 AC074183.2-201ENST00000623112 922 ntBASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF4Q9BSR8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
YIPF4Q9BSR8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 AC022616.5-201ENST00000518796 181 ntBASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF4Q9BSR8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.54■■□□□ 1.04
YIPF4Q9BSR8 AC120024.1-201ENST00000562672 995 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms