Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL13Q99616 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL13Q99616 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL13Q99616 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL13Q99616 LINC01124-201ENST00000409786 2117 ntBASIC19.33■□□□□ 0.68
CCL13Q99616 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL13Q99616 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCL13Q99616 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.32■□□□□ 0.68
CCL13Q99616 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL13Q99616 KRT125P-201ENST00000546827 989 ntBASIC19.32■□□□□ 0.68
CCL13Q99616 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL13Q99616 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL13Q99616 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL13Q99616 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL13Q99616 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL13Q99616 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCL13Q99616 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCL13Q99616 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL13Q99616 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL13Q99616 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.31■□□□□ 0.68
CCL13Q99616 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL13Q99616 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CCL13Q99616 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL13Q99616 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCL13Q99616 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL13Q99616 Z92544.1-202ENST00000571933 1220 ntBASIC19.3■□□□□ 0.68
CCL13Q99616 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.3■□□□□ 0.68
CCL13Q99616 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL13Q99616 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL13Q99616 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL13Q99616 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL13Q99616 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL13Q99616 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 AC021242.3-201ENST00000607598 1377 ntBASIC19.29■□□□□ 0.68
CCL13Q99616 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL13Q99616 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL13Q99616 MIR4787-201ENST00000607364 84 ntBASIC19.28■□□□□ 0.68
CCL13Q99616 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL13Q99616 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL13Q99616 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL13Q99616 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL13Q99616 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL13Q99616 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL13Q99616 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL13Q99616 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCL13Q99616 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL13Q99616 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL13Q99616 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL13Q99616 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCL13Q99616 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCL13Q99616 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCL13Q99616 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL13Q99616 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL13Q99616 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL13Q99616 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL13Q99616 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.26■□□□□ 0.67
CCL13Q99616 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.26■□□□□ 0.67
CCL13Q99616 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL13Q99616 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
CCL13Q99616 AL022069.1-201ENST00000568025 1636 ntBASIC19.25■□□□□ 0.67
CCL13Q99616 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.25■□□□□ 0.67
CCL13Q99616 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL13Q99616 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL13Q99616 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCL13Q99616 AC131274.2-201ENST00000580697 1507 ntBASIC19.25■□□□□ 0.67
CCL13Q99616 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL13Q99616 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.25■□□□□ 0.67
CCL13Q99616 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL13Q99616 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL13Q99616 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL13Q99616 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL13Q99616 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCL13Q99616 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL13Q99616 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms