Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RAB40CQ96S21 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40CQ96S21 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40CQ96S21 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB40CQ96S21 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 AC233723.2-201ENST00000623798 2106 ntBASIC18.67■□□□□ 0.58
RAB40CQ96S21 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40CQ96S21 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40CQ96S21 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40CQ96S21 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB40CQ96S21 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB40CQ96S21 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB40CQ96S21 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40CQ96S21 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAB40CQ96S21 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40CQ96S21 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40CQ96S21 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RAB40CQ96S21 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40CQ96S21 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40CQ96S21 AC025884.2-201ENST00000553429 711 ntBASIC18.64■□□□□ 0.57
RAB40CQ96S21 AC016575.1-201ENST00000607026 382 ntBASIC18.64■□□□□ 0.57
RAB40CQ96S21 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40CQ96S21 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40CQ96S21 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RAB40CQ96S21 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40CQ96S21 PKD1P6-201ENST00000343738 4769 ntBASIC18.64■□□□□ 0.57
RAB40CQ96S21 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB40CQ96S21 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40CQ96S21 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40CQ96S21 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40CQ96S21 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB40CQ96S21 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RAB40CQ96S21 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RAB40CQ96S21 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB40CQ96S21 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40CQ96S21 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB40CQ96S21 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB40CQ96S21 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40CQ96S21 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40CQ96S21 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40CQ96S21 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40CQ96S21 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40CQ96S21 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB40CQ96S21 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms