Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00052Q96N35 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00052Q96N35 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00052Q96N35 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC00052Q96N35 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00052Q96N35 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00052Q96N35 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LINC00052Q96N35 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00052Q96N35 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00052Q96N35 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00052Q96N35 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00052Q96N35 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00052Q96N35 AL391422.3-201ENST00000603791 2761 ntBASIC18.93■□□□□ 0.62
LINC00052Q96N35 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LINC00052Q96N35 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LINC00052Q96N35 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00052Q96N35 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00052Q96N35 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC00052Q96N35 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00052Q96N35 AC110285.7-201ENST00000624417 1536 ntBASIC18.93■□□□□ 0.62
LINC00052Q96N35 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LINC00052Q96N35 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC00052Q96N35 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LINC00052Q96N35 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC00052Q96N35 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC00052Q96N35 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.92■□□□□ 0.62
LINC00052Q96N35 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00052Q96N35 GUSBP5-202ENST00000510805 1989 ntBASIC18.92■□□□□ 0.62
LINC00052Q96N35 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00052Q96N35 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LINC00052Q96N35 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LINC00052Q96N35 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00052Q96N35 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.89■□□□□ 0.62
LINC00052Q96N35 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00052Q96N35 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LINC00052Q96N35 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.89■□□□□ 0.62
LINC00052Q96N35 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
LINC00052Q96N35 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00052Q96N35 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC00052Q96N35 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00052Q96N35 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00052Q96N35 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LINC00052Q96N35 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LINC00052Q96N35 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 PKD1P6-201ENST00000343738 4769 ntBASIC18.88■□□□□ 0.61
LINC00052Q96N35 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00052Q96N35 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LINC00052Q96N35 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 ECEL1P1-201ENST00000373592 1742 ntBASIC18.87■□□□□ 0.61
LINC00052Q96N35 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms