Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF48Q96MX3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF48Q96MX3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF48Q96MX3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF48Q96MX3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF48Q96MX3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 MIR6722-201ENST00000617286 78 ntBASIC18.77■□□□□ 0.6
ZNF48Q96MX3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF48Q96MX3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF48Q96MX3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF48Q96MX3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF48Q96MX3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF48Q96MX3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 AC005837.3-201ENST00000612163 286 ntBASIC18.75■□□□□ 0.59
ZNF48Q96MX3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
ZNF48Q96MX3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF48Q96MX3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.73■□□□□ 0.59
ZNF48Q96MX3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF48Q96MX3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF48Q96MX3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 AC142381.3-201ENST00000568208 1670 ntBASIC18.71■□□□□ 0.59
ZNF48Q96MX3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ZNF48Q96MX3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF48Q96MX3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF48Q96MX3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms