Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC00479Q96M42 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00479Q96M42 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC00479Q96M42 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00479Q96M42 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00479Q96M42 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LINC00479Q96M42 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00479Q96M42 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00479Q96M42 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC00479Q96M42 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.58■□□□□ 0.4
LINC00479Q96M42 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LINC00479Q96M42 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00479Q96M42 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00479Q96M42 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00479Q96M42 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00479Q96M42 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00479Q96M42 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LINC00479Q96M42 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC00479Q96M42 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
LINC00479Q96M42 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 C1orf229-201ENST00000623686 2258 ntBASIC17.56■□□□□ 0.4
LINC00479Q96M42 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00479Q96M42 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC00479Q96M42 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00479Q96M42 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 AC025884.2-201ENST00000553429 711 ntBASIC17.54■□□□□ 0.4
LINC00479Q96M42 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC00479Q96M42 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LINC00479Q96M42 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00479Q96M42 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.53■□□□□ 0.4
LINC00479Q96M42 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 RPS2P35-201ENST00000443417 897 ntBASIC17.53■□□□□ 0.4
LINC00479Q96M42 AL157400.5-201ENST00000507624 621 ntBASIC17.53■□□□□ 0.4
LINC00479Q96M42 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LINC00479Q96M42 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00479Q96M42 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00479Q96M42 ANOS2P-203ENST00000472227 1816 ntBASIC17.52■□□□□ 0.4
LINC00479Q96M42 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LINC00479Q96M42 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LINC00479Q96M42 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC00479Q96M42 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00479Q96M42 MIR3960-201ENST00000583311 91 ntBASIC17.52■□□□□ 0.4
LINC00479Q96M42 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.52■□□□□ 0.4
LINC00479Q96M42 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00479Q96M42 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.52■□□□□ 0.39
LINC00479Q96M42 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LINC00479Q96M42 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms