Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.77■□□□□ 0.76
SPG11Q96JI7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
SPG11Q96JI7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.77■□□□□ 0.76
SPG11Q96JI7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPG11Q96JI7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPG11Q96JI7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.77■□□□□ 0.75
SPG11Q96JI7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.76■□□□□ 0.75
SPG11Q96JI7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPG11Q96JI7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SPG11Q96JI7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPG11Q96JI7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SPG11Q96JI7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
SPG11Q96JI7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPG11Q96JI7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPG11Q96JI7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.76■□□□□ 0.75
SPG11Q96JI7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPG11Q96JI7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPG11Q96JI7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPG11Q96JI7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPG11Q96JI7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.75■□□□□ 0.75
SPG11Q96JI7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPG11Q96JI7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPG11Q96JI7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPG11Q96JI7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPG11Q96JI7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPG11Q96JI7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SPG11Q96JI7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 AC004448.1-201ENST00000458332 883 ntBASIC19.73■□□□□ 0.75
SPG11Q96JI7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.73■□□□□ 0.75
SPG11Q96JI7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.73■□□□□ 0.75
SPG11Q96JI7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 AC009102.2-201ENST00000606772 1639 ntBASIC19.73■□□□□ 0.75
SPG11Q96JI7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SPG11Q96JI7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.73■□□□□ 0.75
SPG11Q96JI7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPG11Q96JI7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L2-201ENST00000561772 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L6-201ENST00000626483 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L1-201ENST00000627662 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L8-201ENST00000629013 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L3-201ENST00000630187 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L7-201ENST00000630678 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 DUX4L5-201ENST00000630834 1275 ntBASIC19.72■□□□□ 0.75
SPG11Q96JI7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.72■□□□□ 0.75
SPG11Q96JI7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SPG11Q96JI7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SPG11Q96JI7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPG11Q96JI7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPG11Q96JI7 AL031602.1-201ENST00000633169 911 ntBASIC19.71■□□□□ 0.75
SPG11Q96JI7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPG11Q96JI7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPG11Q96JI7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPG11Q96JI7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SPG11Q96JI7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.7■□□□□ 0.74
SPG11Q96JI7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPG11Q96JI7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPG11Q96JI7 AC099791.1-201ENST00000416440 715 ntBASIC19.7■□□□□ 0.74
SPG11Q96JI7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.7■□□□□ 0.74
SPG11Q96JI7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.7■□□□□ 0.74
SPG11Q96JI7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPG11Q96JI7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPG11Q96JI7 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.7■□□□□ 0.74
SPG11Q96JI7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SPG11Q96JI7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPG11Q96JI7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPG11Q96JI7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPG11Q96JI7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPG11Q96JI7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SPG11Q96JI7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.68■□□□□ 0.74
SPG11Q96JI7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.68■□□□□ 0.74
SPG11Q96JI7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPG11Q96JI7 AC233992.3-201ENST00000607491 485 ntBASIC19.68■□□□□ 0.74
SPG11Q96JI7 C17orf82-201ENST00000623772 1530 ntBASIC19.68■□□□□ 0.74
SPG11Q96JI7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPG11Q96JI7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPG11Q96JI7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPG11Q96JI7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPG11Q96JI7 AC099791.2-201ENST00000605725 427 ntBASIC19.68■□□□□ 0.74
SPG11Q96JI7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms