Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.4■□□□□ 0.7
NEIL1Q96FI4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
NEIL1Q96FI4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEIL1Q96FI4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NEIL1Q96FI4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEIL1Q96FI4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.39■□□□□ 0.7
NEIL1Q96FI4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NEIL1Q96FI4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEIL1Q96FI4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEIL1Q96FI4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEIL1Q96FI4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.38■□□□□ 0.69
NEIL1Q96FI4 MIR6089-201ENST00000616698 64 ntBASIC19.38■□□□□ 0.69
NEIL1Q96FI4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 AF131216.4-201ENST00000638924 1588 ntBASIC19.37■□□□□ 0.69
NEIL1Q96FI4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEIL1Q96FI4 AC092028.1-203ENST00000608262 953 ntBASIC19.37■□□□□ 0.69
NEIL1Q96FI4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEIL1Q96FI4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 TSPY9P-201ENST00000440215 945 ntBASIC19.35■□□□□ 0.69
NEIL1Q96FI4 TSPY11P-201ENST00000442607 1045 ntBASIC19.35■□□□□ 0.69
NEIL1Q96FI4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
NEIL1Q96FI4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 AL356441.2-201ENST00000443009 864 ntBASIC19.34■□□□□ 0.69
NEIL1Q96FI4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.34■□□□□ 0.69
NEIL1Q96FI4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
NEIL1Q96FI4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEIL1Q96FI4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NEIL1Q96FI4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEIL1Q96FI4 UNC93B8-201ENST00000511903 705 ntBASIC19.33■□□□□ 0.68
NEIL1Q96FI4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NEIL1Q96FI4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEIL1Q96FI4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEIL1Q96FI4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 KRT16P3-201ENST00000439127 1283 ntBASIC19.32■□□□□ 0.68
NEIL1Q96FI4 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.32■□□□□ 0.68
NEIL1Q96FI4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEIL1Q96FI4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEIL1Q96FI4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms