Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A1Q8WWI5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A1Q8WWI5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A1Q8WWI5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A1Q8WWI5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A1Q8WWI5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC44A1Q8WWI5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A1Q8WWI5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A1Q8WWI5 AC009831.1-201ENST00000580420 1582 ntBASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A1Q8WWI5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC44A1Q8WWI5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC44A1Q8WWI5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC44A1Q8WWI5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 GPX1-201ENST00000419349 1106 ntBASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC44A1Q8WWI5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 MIR4449-201ENST00000578365 66 ntBASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC44A1Q8WWI5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC44A1Q8WWI5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 AC090877.2-201ENST00000558441 1738 ntBASIC23.11■■□□□ 1.29
SLC44A1Q8WWI5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 AC133552.2-201ENST00000619106 1032 ntBASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 ANOS2P-203ENST00000472227 1816 ntBASIC23.1■■□□□ 1.29
SLC44A1Q8WWI5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC44A1Q8WWI5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms