Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.2■■■□□ 2.75
TMC1Q8TDI8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.2■■■□□ 2.75
TMC1Q8TDI8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
TMC1Q8TDI8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
TMC1Q8TDI8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 MIR3621-201ENST00000580529 85 ntBASIC32.19■■■□□ 2.74
TMC1Q8TDI8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC32.19■■■□□ 2.74
TMC1Q8TDI8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TMC1Q8TDI8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TMC1Q8TDI8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 AL356740.2-201ENST00000601559 647 ntBASIC32.16■■■□□ 2.74
TMC1Q8TDI8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
TMC1Q8TDI8 AC135731.1-201ENST00000569415 2548 ntBASIC32.16■■■□□ 2.74
TMC1Q8TDI8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 AK3-203ENST00000447596 705 ntTSL 2 BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TMC1Q8TDI8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TMC1Q8TDI8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.14■■■□□ 2.74
TMC1Q8TDI8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.14■■■□□ 2.74
TMC1Q8TDI8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
TMC1Q8TDI8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TMC1Q8TDI8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TMC1Q8TDI8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
TMC1Q8TDI8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.13■■■□□ 2.73
TMC1Q8TDI8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC32.13■■■□□ 2.73
TMC1Q8TDI8 AC142381.3-201ENST00000568208 1670 ntBASIC32.12■■■□□ 2.73
TMC1Q8TDI8 AL136116.3-201ENST00000402907 1138 ntBASIC32.12■■■□□ 2.73
TMC1Q8TDI8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.12■■■□□ 2.73
TMC1Q8TDI8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
TMC1Q8TDI8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC32.11■■■□□ 2.73
TMC1Q8TDI8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
TMC1Q8TDI8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.09■■■□□ 2.73
TMC1Q8TDI8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.08■■■□□ 2.73
TMC1Q8TDI8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
TMC1Q8TDI8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.08■■■□□ 2.73
TMC1Q8TDI8 MIR4466-201ENST00000606121 54 ntBASIC32.08■■■□□ 2.73
TMC1Q8TDI8 MIR6722-201ENST00000617286 78 ntBASIC32.08■■■□□ 2.73
TMC1Q8TDI8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TMC1Q8TDI8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
TMC1Q8TDI8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
TMC1Q8TDI8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
TMC1Q8TDI8 AC019069.1-201ENST00000610008 1333 ntBASIC32.07■■■□□ 2.72
TMC1Q8TDI8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms