Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC148Q8NFR7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CCDC148Q8NFR7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC148Q8NFR7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC148Q8NFR7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC148Q8NFR7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC148Q8NFR7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC148Q8NFR7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC148Q8NFR7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 AC141586.4-201ENST00000624558 1573 ntBASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 LINC01124-201ENST00000409786 2117 ntBASIC26.6■■□□□ 1.85
CCDC148Q8NFR7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC148Q8NFR7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC148Q8NFR7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.59■■□□□ 1.85
CCDC148Q8NFR7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CCDC148Q8NFR7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CCDC148Q8NFR7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 AL161729.1-201ENST00000604104 1402 ntBASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 AL035685.1-201ENST00000636663 812 ntBASIC26.58■■□□□ 1.85
CCDC148Q8NFR7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CCDC148Q8NFR7 AC021242.3-201ENST00000607598 1377 ntBASIC26.58■■□□□ 1.84
CCDC148Q8NFR7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 LINC00543-201ENST00000567234 1845 ntBASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC148Q8NFR7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 KRT125P-201ENST00000546827 989 ntBASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 AL022069.1-201ENST00000568025 1636 ntBASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC148Q8NFR7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 AC131274.2-201ENST00000580697 1507 ntBASIC26.55■■□□□ 1.84
CCDC148Q8NFR7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC148Q8NFR7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC148Q8NFR7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC148Q8NFR7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC148Q8NFR7 AC239859.2-201ENST00000444165 318 ntBASIC26.52■■□□□ 1.84
CCDC148Q8NFR7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC148Q8NFR7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC148Q8NFR7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms