Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 AC139795.1-202ENST00000500444 432 ntBASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 DUX4L18-201ENST00000553347 1267 ntBASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 AC011551.1-201ENST00000614101 683 ntBASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
LSMEM1Q8N8F7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 ATP5G2P3-201ENST00000429083 425 ntBASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSMEM1Q8N8F7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 AC004987.1-201ENST00000428627 508 ntBASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 AC074183.2-201ENST00000623112 922 ntBASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 AL161729.1-201ENST00000604104 1402 ntBASIC21.11■□□□□ 0.97
LSMEM1Q8N8F7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LSMEM1Q8N8F7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.09■□□□□ 0.97
LSMEM1Q8N8F7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LSMEM1Q8N8F7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.08■□□□□ 0.96
LSMEM1Q8N8F7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.07■□□□□ 0.96
LSMEM1Q8N8F7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 TSPY13P-201ENST00000338964 914 ntBASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSMEM1Q8N8F7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 BHLHE23-202ENST00000612929 1109 ntBASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSMEM1Q8N8F7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms