Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SRRM1Q8IYB3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRRM1Q8IYB3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.33■■□□□ 1.32
SRRM1Q8IYB3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SRRM1Q8IYB3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 AL117328.2-201ENST00000624617 1940 ntBASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SRRM1Q8IYB3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRRM1Q8IYB3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRRM1Q8IYB3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SRRM1Q8IYB3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
SRRM1Q8IYB3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SRRM1Q8IYB3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.27■■□□□ 1.32
SRRM1Q8IYB3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SRRM1Q8IYB3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SRRM1Q8IYB3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
SRRM1Q8IYB3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRRM1Q8IYB3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 SMPD5-203ENST00000639008 1464 ntBASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SRRM1Q8IYB3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 AC233723.2-201ENST00000623798 2106 ntBASIC23.24■■□□□ 1.31
SRRM1Q8IYB3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 FOXO3B-201ENST00000395675 1928 ntBASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SRRM1Q8IYB3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SRRM1Q8IYB3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRRM1Q8IYB3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SRRM1Q8IYB3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms