Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 PBX2P1-201ENST00000493219 1291 ntBASIC25.52■■□□□ 1.68
RSPH3Q86UC2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RSPH3Q86UC2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RSPH3Q86UC2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.51■■□□□ 1.67
RSPH3Q86UC2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.51■■□□□ 1.67
RSPH3Q86UC2 AC106739.1-201ENST00000617035 715 ntBASIC25.51■■□□□ 1.67
RSPH3Q86UC2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.5■■□□□ 1.67
RSPH3Q86UC2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPH3Q86UC2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 UNC93B3-201ENST00000308076 687 ntBASIC25.48■■□□□ 1.67
RSPH3Q86UC2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RSPH3Q86UC2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
RSPH3Q86UC2 SLC6A10P-202ENST00000431994 2058 ntBASIC25.46■■□□□ 1.67
RSPH3Q86UC2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RSPH3Q86UC2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.46■■□□□ 1.67
RSPH3Q86UC2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
RSPH3Q86UC2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
RSPH3Q86UC2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 AL136162.1-201ENST00000607711 1078 ntBASIC25.45■■□□□ 1.66
RSPH3Q86UC2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RSPH3Q86UC2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RSPH3Q86UC2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RSPH3Q86UC2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
RSPH3Q86UC2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH3Q86UC2 AC142381.2-201ENST00000566120 298 ntBASIC25.43■■□□□ 1.66
RSPH3Q86UC2 MIR6089-201ENST00000616698 64 ntBASIC25.43■■□□□ 1.66
RSPH3Q86UC2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RSPH3Q86UC2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH3Q86UC2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 AC135279.3-201ENST00000610945 1311 ntBASIC25.42■■□□□ 1.66
RSPH3Q86UC2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 AC131274.2-201ENST00000580697 1507 ntBASIC25.42■■□□□ 1.66
RSPH3Q86UC2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH3Q86UC2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 DUX4L19-201ENST00000557448 1267 ntBASIC25.41■■□□□ 1.66
RSPH3Q86UC2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH3Q86UC2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH3Q86UC2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 AL022069.1-201ENST00000568025 1636 ntBASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms