Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST2H3AQ71DI3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST2H3AQ71DI3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 AL033527.3-201ENST00000566366 1196 ntBASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 AC010980.1-201ENST00000587192 1142 ntBASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 AL161729.1-201ENST00000604104 1402 ntBASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST2H3AQ71DI3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 KRT18P24-201ENST00000344739 1156 ntBASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST2H3AQ71DI3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST2H3AQ71DI3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 AC120024.1-201ENST00000562672 995 ntBASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIST2H3AQ71DI3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 MIR4508-201ENST00000584178 70 ntBASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST2H3AQ71DI3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HIST2H3AQ71DI3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST2H3AQ71DI3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms