Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COLCA1Q6ZS62 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 AC103724.3-201ENST00000564481 992 ntBASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COLCA1Q6ZS62 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 AF131216.4-201ENST00000638924 1588 ntBASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COLCA1Q6ZS62 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
COLCA1Q6ZS62 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 KRT8P33-201ENST00000508125 1423 ntBASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COLCA1Q6ZS62 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.94■□□□□ 0.78
COLCA1Q6ZS62 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 AC131274.2-201ENST00000580697 1507 ntBASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 AL022069.1-201ENST00000568025 1636 ntBASIC19.93■□□□□ 0.78
COLCA1Q6ZS62 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLCA1Q6ZS62 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COLCA1Q6ZS62 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLCA1Q6ZS62 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLCA1Q6ZS62 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLCA1Q6ZS62 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.9■□□□□ 0.78
COLCA1Q6ZS62 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLCA1Q6ZS62 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.89■□□□□ 0.77
COLCA1Q6ZS62 AL031848.2-201ENST00000607670 837 ntBASIC19.89■□□□□ 0.77
COLCA1Q6ZS62 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA1Q6ZS62 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 ABCB10P4-201ENST00000566803 2184 ntBASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 AC137630.3-201ENST00000607245 391 ntBASIC19.87■□□□□ 0.77
COLCA1Q6ZS62 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA1Q6ZS62 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms