Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPUSD3Q6P087 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPUSD3Q6P087 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RPUSD3Q6P087 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPUSD3Q6P087 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPUSD3Q6P087 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 AC010501.1-201ENST00000606270 1962 ntBASIC21.11■□□□□ 0.97
RPUSD3Q6P087 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 SRD5A1P1-201ENST00000442297 786 ntBASIC21.11■□□□□ 0.97
RPUSD3Q6P087 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.11■□□□□ 0.97
RPUSD3Q6P087 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPUSD3Q6P087 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.1■□□□□ 0.97
RPUSD3Q6P087 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPUSD3Q6P087 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPUSD3Q6P087 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
RPUSD3Q6P087 ERN1-208ENST00000606895 2068 ntBASIC21.09■□□□□ 0.97
RPUSD3Q6P087 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPUSD3Q6P087 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 AC142381.2-201ENST00000566120 298 ntBASIC21.08■□□□□ 0.97
RPUSD3Q6P087 AL136162.1-201ENST00000607711 1078 ntBASIC21.08■□□□□ 0.97
RPUSD3Q6P087 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPUSD3Q6P087 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPUSD3Q6P087 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.08■□□□□ 0.96
RPUSD3Q6P087 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPUSD3Q6P087 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 AC135279.3-201ENST00000610945 1311 ntBASIC21.06■□□□□ 0.96
RPUSD3Q6P087 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 EDA-201ENST00000338901 1233 ntBASIC21.06■□□□□ 0.96
RPUSD3Q6P087 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 SUDS3P1-201ENST00000505831 966 ntBASIC21.06■□□□□ 0.96
RPUSD3Q6P087 DUX4L19-201ENST00000557448 1267 ntBASIC21.06■□□□□ 0.96
RPUSD3Q6P087 AL031432.3-201ENST00000607698 485 ntBASIC21.06■□□□□ 0.96
RPUSD3Q6P087 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPUSD3Q6P087 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPUSD3Q6P087 AC005703.6-201ENST00000623265 1329 ntBASIC21.05■□□□□ 0.96
RPUSD3Q6P087 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPUSD3Q6P087 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPUSD3Q6P087 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.05■□□□□ 0.96
RPUSD3Q6P087 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 AL355001.2-201ENST00000620617 1191 ntBASIC21.04■□□□□ 0.96
RPUSD3Q6P087 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.04■□□□□ 0.96
RPUSD3Q6P087 AC145676.1-201ENST00000514988 2004 ntBASIC21.04■□□□□ 0.96
RPUSD3Q6P087 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.03■□□□□ 0.96
RPUSD3Q6P087 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPUSD3Q6P087 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPUSD3Q6P087 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPUSD3Q6P087 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.02■□□□□ 0.96
RPUSD3Q6P087 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms